SNP Profiles of MO 9 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CT	CC	GG	GT	AA	AC	CC	GG	GG	AA	TT	AA
1._MO_9	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
2._MO_9	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
3._MO_9	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
4._MO_9	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
5._MO_9	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
6._MO_9	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
7._GC-05-119-3-21	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
8._GC-05-119-3-21	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
9._GC-05-119-3-21	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
10._GC-05-071-2-22	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
11._GC-05-071-2-22	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
12._RUQ_1691	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
13._MO_9	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
14._MO_9	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
15._MO_9	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
16._MO_9	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
17._MO_9	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
18._GC-05-071-2-22	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
19._GC-05-119-3-21	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
20._GC-05-071-2-22	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
21._GC-05-071-2-22	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_
22._GC-05-071-2-22	_	_	_	_	_	_	_	AA	_	_	_	AG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CT	AA	CT	CC	AG	GG	AA	CC	TT	CC	GG	CC
1._MO_9	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
2._MO_9	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
3._MO_9	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
4._MO_9	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
5._MO_9	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
6._MO_9	_	_	_	_	_	CC	_	GG	_	CC	_	_	_	_
7._GC-05-119-3-21	GG	_	_	_	_	CC	_	GG	_	CC	TT	_	_	_
8._GC-05-119-3-21	GG	_	_	_	_	CC	_	GG	_	CC	TT	_	_	_
9._GC-05-119-3-21	GG	_	_	_	_	CC	_	GG	_	CC	TT	_	_	_
10._GC-05-071-2-22	GG	_	_	_	_	CC	_	GG	_	CC	TT	_	_	_
11._GC-05-071-2-22	GG	_	_	_	_	CC	_	GG	_	CC	TT	_	_	_
12._RUQ_1691	GG	_	_	_	_	CC	_	GG	_	CC	AA	_	_	_
13._MO_9	_	_	_	_	_	AC	_	CG	_	AC	_	_	_	_
14._MO_9	_	_	_	_	_	AC	_	CG	_	AC	_	_	_	_
15._MO_9	_	_	_	_	_	AC	_	CG	_	AC	_	_	_	_
16._MO_9	_	_	_	_	_	AC	_	CG	_	AC	_	_	_	_
17._MO_9	_	_	_	_	_	AC	_	CG	_	AC	_	_	_	_
18._GC-05-071-2-22	AA	_	_	_	_	AC	_	CG	_	AC	CC	_	_	_
19._GC-05-119-3-21	AA	_	_	_	_	AC	_	CG	_	AC	CC	_	_	_
20._GC-05-071-2-22	AA	_	_	_	_	AC	_	CG	_	AC	CC	_	_	_
21._GC-05-071-2-22	AA	_	_	_	_	AC	_	CG	_	AC	CC	_	_	_
22._GC-05-071-2-22	AA	_	_	_	_	AC	_	CG	_	AC	CC	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CC	CT	GG	AG	CT	TT	AA	AA	TT	GG	GG	CC	AG
1._MO_9	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
2._MO_9	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
3._MO_9	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
4._MO_9	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
5._MO_9	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
6._MO_9	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
7._GC-05-119-3-21	AA	_	CC	GG	AG	_	_	AA	_	GG	GG	GG	_	AG
8._GC-05-119-3-21	AA	_	CC	GG	AG	_	_	AA	_	GG	GG	GG	_	AG
9._GC-05-119-3-21	AA	_	CC	GG	AG	_	_	AA	_	GG	GG	GG	_	AG
10._GC-05-071-2-22	AA	_	CC	GG	AG	_	_	AA	_	GG	GG	GG	_	AG
11._GC-05-071-2-22	AA	_	CC	GG	AG	_	_	AA	_	GG	GG	_	_	AG
12._RUQ_1691	_	_	_	CC	AG	_	_	AA	_	CC	CC	GG	_	AG
13._MO_9	AA	_	_	GT	_	_	_	_	_	_	CC	_	_	AG
14._MO_9	AA	_	_	GT	_	_	_	_	_	_	CC	_	_	AG
15._MO_9	AA	_	_	GT	_	_	_	_	_	_	CC	_	_	AG
16._MO_9	AA	_	_	GT	_	_	_	_	_	_	CC	_	_	AG
17._MO_9	AA	_	_	GT	_	_	_	_	_	_	CC	_	_	AG
18._GC-05-071-2-22	AA	_	CT	GT	AG	_	_	AC	_	CG	CC	AG	_	AG
19._GC-05-119-3-21	AA	_	CT	GT	AG	_	_	AC	_	CG	CC	AG	_	AG
20._GC-05-071-2-22	AA	_	CT	GT	AG	_	_	AC	_	CG	CC	AG	_	AG
21._GC-05-071-2-22	AA	_	CT	GT	AG	_	_	AC	_	CG	CC	AG	_	AG
22._GC-05-071-2-22	AA	_	CT	GT	AG	_	_	AC	_	CG	CC	AG	_	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CT	TT	AA	TT	GG	CT	CC	GG	AA	TT	GG	TT	GG	GG
1._MO_9	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
2._MO_9	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
3._MO_9	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
4._MO_9	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
5._MO_9	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
6._MO_9	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
7._GC-05-119-3-21	CT	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
8._GC-05-119-3-21	CT	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
9._GC-05-119-3-21	CT	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
10._GC-05-071-2-22	CT	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
11._GC-05-071-2-22	CT	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
12._RUQ_1691	_	_	_	_	GG	_	_	_	_	AA	_	_	_	_
13._MO_9	_	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
14._MO_9	_	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
15._MO_9	_	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
16._MO_9	_	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
17._MO_9	_	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
18._GC-05-071-2-22	CC	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
19._GC-05-119-3-21	CC	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
20._GC-05-071-2-22	CC	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
21._GC-05-071-2-22	CC	_	_	_	AG	_	CT	_	_	GT	_	_	_	_
22._GC-05-071-2-22	CC	_	_	_	AG	_	CT	_	_	GT	_	_	_	_

	57	58	59
_Input profile	CG	TT	TT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-05-119-3-21	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GC-05-119-3-21	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GC-05-119-3-21	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._GC-05-071-2-22	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._GC-05-071-2-22	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._RUQ_1691	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._MO_9	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
18._GC-05-071-2-22	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
19._GC-05-119-3-21	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
20._GC-05-071-2-22	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
21._GC-05-071-2-22	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
22._GC-05-071-2-22	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: MO_9 RUQ_1691

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._MO_9

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5222 5

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._MO_9

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5222 1 > FP

Dapeng Zhang, 2016

3._MO_9

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5321 2

Dapeng Zhang, 2016

4._MO_9

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5321 3 > FP

Dapeng Zhang, 2016

5._MO_9

identical
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5321 4 > FP

Dapeng Zhang, 2016

6._MO_9

identical
13 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Marper D835

Dapeng Zhang, 2016

7._MO_9 GC-05-119-3-21

92.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP3

8._MO_9 GC-05-119-3-21

92.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP4

9._MO_9 GC-05-119-3-21

92.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

10._MO_9 GC-05-071-2-22

92.9 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

11._MO_9 GC-05-071-2-22

92.5 %
20 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

12._MO_9 RUQ_1691

70.6 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

13._MO_9

57.7 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5321 5

Dapeng Zhang, 2016

14._MO_9

57.7 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5222 2 > FP

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

15._MO_9

57.7 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5222 2 > FP

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

16._MO_9

57.7 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5222 3 > FP

Dapeng Zhang, 2016

17._MO_9

57.7 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 5222 4 > FP

Dapeng Zhang, 2016

18._MO_9 GC-05-071-2-22

52.4 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

19._MO_9 GC-05-119-3-21

52.4 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

20._MO_9 GC-05-071-2-22

52.4 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP4

21._MO_9 GC-05-071-2-22

52.4 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

22._MO_9 GC-05-071-2-22

52.4 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1253	53	TcSNP1275	54	TcSNP1293	55	TcSNP1401
56	TcSNP1404	57	TcSNP1458	58	TcSNP1524	59	TcSNP1527